Prevalence of MTHFR Gene (C677T and A1298C) Polymorphism in the Syrian Coastal Area

 

Ariana Younes1*, Mazen Khaddour1, Mazen Salloum2, Suzan Samra1,3, Samer Akel4

1Department of Biochemistry and Microbiology, Tishreen University, Latakia – Syria.

2AlHawash Private University, Homs, Syria.

3Al-Andalus University for Medical Sciences, Tartous, Syria.

4Assistant Professor, Department of Oncology and Hematology, Tishreen University Hospital Latakia – Syria.

*Corresponding Author E-mail: arianayounis@tishreen.edu.sy, ph.arianayounes@gmail.com

 

ABSTRACT:

The 5,10-methylenetetrahydrofolate reductase (MTHFR) gene mutations can reduce the activity of the enzyme, which has been shown to be a significant factor in the risk of developing certain types of cancer and numerous other diseases, including cardiovascular conditions, diabetes, ischemia, venous thrombosis, hypotonia, and many others. This study aims to determine the frequency of the two most prevalent MTHFR gene polymorphisms, C677T and A1298C, in the Syrian coastal population. Real-time PCR is used to detect MTHFR gene variants in samples from seventy healthy males from Syrian Coastal Area. The frequency of the C/C, C/T, and T/T genotypes for the C677T polymorphism was 47.14 percent, 38.57 percent, and 14.29 percent, respectively. The overall carrier rate was 52.86%, and the allelic frequency was 0.336. The genotypic prevalence of A/A, A/C, and C/C for the A1298C polymorphism was 44.29%, 35.71%, and 20%, respectively, with an allelic frequency of 0.378, while the overall carrier rate was 55.71%. In conclusion, the high prevalence of the MTHFR A1298C polymorphism is a significant finding that must be investigated in terms of clinical implications and reveals an additional genetic trait unique to the Syrian coast population.

 

KEYWORDS: MTHFR, C677T, A1298C, Polymorphism, Gene.

 

 


INTRODUCTION: 

The MTHFR gene produces the rate-limiting enzyme of the methyl cycle, Methylenetetrahydrofolate reductase (MTHFR). As a co-substrate for the re-methylation of homocysteine to methionine and the production of tetrahydrofolate, MTHFR catalyzes the conversion of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate. Methionine is needed for the synthesis of amino acids and proteins, and the production of tetrahydrofolate is crucial for the synthesis of macromolecules (DNA and RNA) required for cell division1,2.

 

Particularly in individuals with folate deficiency, genetic mutations in the MTHFR gene may cause dysfunction or inactivation of this enzyme, resulting in modestly elevated homocysteine levels3,4.

 

The short arm of chromosome 1 contains the genomic locus for the MTHFR gene (1p36.2)2. This gene's DNA sequence is around 2.2 kilobases (kb) long and has 12 exons5. Severe enzymatic deficits are linked to 109 variants in the MTHFR gene6. While the C677T (thermolabile alanine/valine) and the A1298C are two frequent polymorphisms that are linked to decreased enzyme activity7.

 

Exon 4 contains the C677T polymorphism, which converts codon 222 from alanine to valine. The MTHFR cofactor flavin adenine dinucleotide binds to bases in this region (FAD). The MTHFR C677T genotype exhibits 30% less in vitro MTHFR enzyme activity compared to the wild type. The second MTHFR polymorphism, A1298C, in exon 7 replaces glutamate at codon 429 with alanine. As a result of this polymorphism in the S-adenosyl methionine (SAM) regulatory domain, the MTHFR enzyme undergoes conformational changes that impact enzymatic activity5.

 

According to many studies8-12, the amount of MTHFR activity may be a significant factor influencing the risk of developing some cancers, including bladder cancer, breast cancer13, colorectal cancer14, oral squamous cell carcinoma15,16 and leukemia17. Other illnesses at risk include preeclampsia, Alzheimer's disease18, congenital heart problems, cleft palate, diabetes19-20, hypotonia, schizophrenia21, depression, and birth deformities5.

 

It is unknown how prevalent the polymorphisms C677T and A1298C are in the coastal region of Syria. As MTHFR polymorphisms C677T and A1298C are associated with distinct diseases, the purpose of this study is to determine the frequency of these two variants (in this region of the country). This data will aid in the identification of population-based risk factors for a number of congenital and other anomalies associated with MTHFR polymorphism.

 

MATERIALS AND METHODS:

Study population:

After verbal consent seventy healthy men over the age of 40 from various regions of the country were comprised to our research sample. Samples were collected in the Central laboratory at Tishreen University Hospital (TUH).

 

Samples and DNA extraction:

Blood was drawn into vacutainer tubes anticoagulated with EDTA. DNA was extracted using the silica membrane column-based Generi Biotech extraction kit (Machkova 587; Hradec Králové, Czech Republic) as soon as it was collected.

 

Real-time PCR:

The gb HEMO MTHFR (C677T) and gb HEMO MTHFR (A1298C) (Machkova 587; Hradec Králové, Czech Republic) were used to identify the MTHFR gene polymorphisms C677T and A1298C, respectively.

 

Detection is based on real-time PCR with the use of fluorescently labelled probes, and specifically on the principle of allelic discrimination.

 

Statistical analysis:

Statistical analysis was performed using RStudio®, and results are expressed as percentage and allele frequency (calculated using the Hardy-Weinberg model).

 

RESULTS:

Our study included 70 healthy males from the Syrian coast aged over 40 years old. The results showed that for the MTHFR 677 polymorphism, the WT genotype (C/C) was the most prevalent (47.14%) with an overall carrier rate of 52.86% for the mutation (Table 1).

 

As for the MTHFR 1298 polymorphism, the WT genotype (A/A) was the most prevalent (44.29%). The overall carrier rate of the mutation was55.71%(Table 1).

 

Table 1: Genotype and Allele Frequency of the C677T and A1298C Polymorphisms among Syrians.

MTHFR 677 Genotypes (Total 70)

Alleles

C/C

C/T

T/T

C

T

33 (47.14%)

27 (38.57%)

10 (14.29%)

0.664

0.336

MTHFR 1298 Genotypes (Total 70)

Alleles

A/A

A/C

C/C

A

C

31 (44.29%)

25 (35.71%)

14 (20%)

0.622

0.378

 

We performed a gene combination analysis as the combined distribution of MTHFR C677T and A1298C variants is confirmed to have elevated risks for disease development such as cancer22,23. The results are showed in (Table 2).

 

Table 2: Combined MTHFR C677T and A1298C Genotypes

C677T/A1298C

N (%)

CC/AA

8 (11.4)

CC/AC

12 (17.2)

CC/CC

13 (18.5)

CT/AA

14 (20)

CT/AC

12 (17.2)

CT/CC

1 (1.4)

TT/AA

9 (12.9)

TT/AC

1 (1.4)

TT/CC

0 (0)

 

According to the research, Tables 3 and 4 classify the distribution of the MTHFR C677T and A1298C alleles in various global populations.

 

Table 3: Allele Frequencies of MTHFR C677T Polymorphism Among Different Ethnic Populations

Population

Allele Frequency

T/T genotype frequency (%)

Reference

Mexican

0.586

34.8

24

Chinese

0.552

32.2

25

Italian

0.447

19.84

26

Italian

0.40

16

27

Asian

0.4

20

28

Japanese

0.38

11

29

Brazilian caucasian

0.373

10.3

1

European-White

0.362

9.6

28

Greek

0.353

8.1

30

Syrian

0.336

14.29

Present Study

Turkish

0.33

9.6

31

German

0.31

7.19

32

United Kingdom

0.293

12.28

33

dutch

0.26

5

34

ameridian

0.24

7.8

28

Lebanese

0.219

2.45

35

USA

0.21

5

36

Brazilian Black

0.2

1.45

1

lebanese

0.19

3.9

37

Jordanian

0.16

8

38

brazilian indian

0.114

1.2

1

Bahraini

0.11

2.63

35

African americans (USA)

0.11

0

39

tamilians (indian)

0.075

0

40

african black

0.052

0

28

Table 4: Allele Frequencies of MTHFR A1298c Polymorphism Among Different Ethnic Populations

Population

Allele Frequency

C/C Genotype Frequency (%)

Reference

lebanese

0.49

23.9

37

syrian

0.378

20

Present Study

tamilians (indian)

0.35

10

40

caucasian australian

0.34

11.8

41

Bahraini

0.34

7.3

42

caucasians

0.338

12

43

United Kingdom

0.333

9.65

33

Turkish

0.331

10

31

corsica island (france)

0.330

6

44

sweden

0.324

10.4

45

los angeles (white)

0.30

7.9

46

Italian

0.295

8.17

26

canadian

0.276

9

7

italian

0.268

4.6

47

hmong

0.265

7

48

italian

0.25

5.9

49

USA caucasians

0.25

4

50

african american

0.25

2.1

46

USA Hispanics

0.23

4

50

brazilian

0.21

7.2

51

Mexican

0.20

2.6

46

Chinese

0.176

3.8

52

Asian

0.16

1.9

46

Japanese

0.16

1.3

53

Indians

0.10

3

54

 

DISCUSSION:

The MTHFR polymorphisms' allele frequencies reveal racial and geographic differences among various groups. The Mexican14, Chinese15, Italian16,17, Asian18, and Italian16,17 populations had high allele frequencies for the C677T polymorphism, with Mexico having the highest allele frequency (0.586). In contrast, the allele frequencies for Black Africans from Zaire and Cameroon18, Tamilians30, African Americans29, and Bahrainis32 populations were noticeably low. Similar variations may be seen in the homozygous polymorphic T/T genotype frequency. The greatest rate (34.8%) is seen in the Mexican population, which is also high in the Chinese, Italian, and Asian populations. The T/T genotype frequency in the current sample (14.29%) was greater than in the Lebanese study27.

 

In the current study, we examined two polymorphisms, MTHFR 677 and 1298, for the first time in a Syrian population. The allele frequency of MTHFR 677 was 0.336. In a healthy Serbian population, the MTHFR C677T allele frequency was reported to be 0.312, which was lower than the allele frequency in our study population and contained a variety of risk factors such as vascular disorders, thrombotic events, disorders of folate metabolism, genetic disorders, recurrent miscarriages, and obstetric complications45.

Unlike the C677T polymorphism, the A1298C polymorphism showed comparable results to the Lebanese study37 that had the higher allele frequency and frequency of the homozygous polymorphic C/C genotype among different ethnic populations. The present study came after the Lebanese study with the second highest allele frequency (0.378) and C/C genotype frequency (20%) worldwide. Our findings are comparable to those of the Tamilians (0.35)40 and Bahraini Arabs (0.34)42. The 1298 C/C genotype is rarely found in Asians and Japanese, with the lowest frequency being found in Indians (0.1)54. This result indicates that whites are more likely than other races to have the 1298C/C genotype.

 

17.14% of the patients in our research sample were heterozygous for both mutations, which is consistent with prior estimates of 15% to 20%7,34. The percentage of doubly heterozygous individuals (677 C/T and 1298 A/C) was highest among Mexican (17.6%) and white women (15.1%) and lowest among African American (6.3%) and Asian (3.8%) women. The absence of individuals who were homozygous for both mutations is consistent with prior studies7,34,55,56.

 

Weakness points to the present study include the small study population from a specific region of the country, and the exclusion of females in study population (as mentioned above white women had 15.1% of double heterozygous). Larger study with healthy volunteers of both sexes from different parts of the country is needed to generalize the present results to the Syrian population.

 

Diverse environmental factors, such as diets high or low in folate and vitamin B12, as well as the origin and relatedness of the world's various ethnic groups, appear to be responsible for the uneven distribution.

 

CONCLUSION:

In conclusion, the preponderance of the 1298 C/C genotype in the Syrian population is a significant finding that must be investigated in terms of clinical importance and reveals an additional genetic characteristic unique to the Syrian Coastal Area population.

 

CONFLICT OF INTEREST:

The authors have no conflicts of interest regarding this investigation.

 

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Received on 30.11.2022            Modified on 22.12.2022

Accepted on 03.01.2023           © RJPT All right reserved

Research J. Pharm. and Tech 2023; 16(9):4365-4369.

DOI: 10.52711/0974-360X.2023.00714